PUBLICATIONS





Publications


McCarthy JJ, Andrews JL, McDearmon EL, Campbell KS, Barber BK, Miller BH, Walker JR, Hogenesch JB, Takahashi JS, Esser KA.
Identification of the circadian transcriptome in adult mouse skeletal muscle.
Physiol Genomics. 2007 Sep 19;31(1):86-95. Epub 2007 Jun 5.
PMID: 17550994 [PubMed - indexed for MEDLINE]

Liu AC, Welsh DK, Ko CH, Tran HG, Zhang EE, Priest AA, Buhr ED, Singer O, Meeker K, Verma IM, Doyle FJ 3rd, Takahashi JS, Kay SA.
Intercellular coupling confers robustness against mutations in the SCN circadian clock network.
Cell. 2007 May 4;129(3):605-16.
PMID: 17482552 [PubMed - indexed for MEDLINE]

Siepka SM, Yoo SH, Park J, Song W, Kumar V, Hu Y, Lee C, Takahashi JS.
Circadian mutant Overtime reveals F-box protein FBXL3 regulation of cryptochrome and period gene expression.
Cell. 2007 Jun 1;129(5):1011-23. Epub 2007 Apr 26.
PMID: 17462724 [PubMed - indexed for MEDLINE]
  Comment in: Cell. 2007 Jun 1;129(5):857-9.
Circadian mutant Overtime reveals F-box protein FBXL3 regulation of cryptochrome and period gene expression. Siepka SM, Yoo SH, Park J, Song W, Kumar V, Hu Y, Lee C, Takahashi JS. Howard Hughes Medical Institute, Northwestern University, 2205 Tech Drive, Evanston, IL 60208, USA.

Boothroyd CE, Wijnen H, Naef F, Saez L, Young MW.
Integration of light and temperature in the regulation of circadian gene expression in Drosophila.
PLoS Genet. 2007 Apr 6;3(4):e54.
PMID: 17411344 [PubMed - indexed for MEDLINE]

Miller BH, McDearmon EL, Panda S, Hayes KR, Zhang J, Andrews JL, Antoch MP, Walker JR, Esser KA, Hogenesch JB, Takahashi JS.Circadian and CLOCK-controlled regulation of the mouse transcriptome and cell proliferation.
Proc Natl Acad Sci U S A. 2007 Feb 27;104(9):3342-7. Epub 2007 Feb 20.
PMID: 17360649 [PubMed - indexed for MEDLINE]

Hong HK, Chong JL, Song W, Song EJ, Jyawook AA, Schook AC, Ko CH, Takahashi JS.
Inducible and reversible Clock gene expression in brain using the tTA system for the study of circadian behavior.
PLoS Genet. 2007 Feb 23;3(2):e33. Epub 2007 Jan 5.
PMID: 17319750 [PubMed - indexed for MEDLINE]

Xu Y, Toh KL, Jones CR, Shin JY, Fu YH, Ptacek LJ.
Modeling of a human circadian mutation yields insights into clock regulation by PER2.
Cell. 2007 Jan 12;128(1):59-70.
PMID: 17218255 [PubMed - indexed for MEDLINE]
  Comment in: Cell. 2007 Jun 1;129(5):1011-23.
Modeling of a human circadian mutation yields insights into clock regulation by PER2. Xu Y, Toh KL, Jones CR, Shin JY, Fu YH, Ptácek LJ. Department of Neurology, University of California, San Francisco, San Francisco, CA 94158.

McDearmon EL, Patel KN, Ko CH, Walisser JA, Schook AC, Chong JL, Wilsbacher LD, Song EJ, Hong HK, Bradfield CA, Takahashi JS.Dissecting the functions of the mammalian clock protein BMAL1 by tissue-specific rescue in mice.
Science. 2006 Nov 24;314(5803):1304-8.
PMID: 17124323 [PubMed - indexed for MEDLINE]

Wijnen H, Young MW.
Interplay of circadian clocks and metabolic rhythms.
Annu Rev Genet. 2006;40:409-48. Review.
PMID: 17094740 [PubMed - indexed for MEDLINE]

Ko CH, Takahashi JS.
Molecular components of the mammalian circadian clock.
Hum Mol Genet. 2006 Oct 15;15 Spec No 2:R271-7. Review.
PMID: 16987893 [PubMed - indexed for MEDLINE]

Vitaterna MH, Ko CH, Chang AM, Buhr ED, Fruechte EM, Schook A, Antoch MP, Turek FW, Takahashi JS.
The mouse Clock mutation reduces circadian pacemaker amplitude and enhances efficacy of resetting stimuli and phase-response curve amplitude.
Proc Natl Acad Sci U S A. 2006 Jun 13;103(24):9327-32. Epub 2006 Jun 5.
PMID: 16754844 [PubMed - indexed for MEDLINE]

Sato TK, Yamada RG, Ukai H, Baggs JE, Miraglia LJ, Kobayashi TJ, Welsh DK, Kay SA, Ueda HR, Hogenesch JB.Feedback repression is required for mammalian circadian clock function.
Nat Genet. 2006 Mar;38(3):312-9. Epub 2006 Feb 12.
PMID: 16474406 [PubMed - indexed for MEDLINE]

Pieper AA, Wu X, Han TW, Estill SJ, Dang Q, Wu LC, Reece-Fincanon S, Dudley CA, Richardson JA, Brat DJ, McKnight SL. 2005. The neuronal PAS domain protein 3 transcription factor controls FGF-mediated adult hippocampal neurogenesis in mice. Proceedings of the National Academy of Sciences of the United States of America 102(39):14052-7.

Wu X, Alexander PB, He Y, Kikkawa M, Vogel P, McKnight SL. 2005.Mammalian sprouty proteins assemble into large monodisperse particles having the properties of intracellular nanobatteries. Proceedings of the National Academy of Sciences of the United States of America 102(39):14058-14062.

Tataroglu Ö, Davidson AJ, Benvenuto LJ, Menaker M. 2006.The methamphetamine-sensitive circadian oscillator (MASCO) in mice. Journal of Biological Rhythms 21(3):185-194.

Franken P, Dudley CA, Estill SJ, Barakat M, Thomason R, O’Hara BF, McKnight SL. 2006. NPAS2 as a transcriptional regulator of non-rapid eye movement sleep: Genotype and sex interactions. Proceedings of the National Academy of Sciences of the United States of America 103(18):7118-7123